Our paper "Knime4Bio: a set of custom nodes for the interpretation of Next Generation Sequencing data with KNIME." has just been published in Bioinformatics
http://bioinformatics.oxfordjournals.org/content/early/2011/10/07/bioinformatics.btr554.abstract
Summary: Here, we describe Knime4Bio, a set of custom nodes for the KNIME (The Konstanz Information Miner) interactive graphical workbench, for the interpretation of large biological datasets. We demonstrate that this tool can be utilised to quickly retrieve previously published scientific findings.
Availability: http://code.google.com/p/knime4bio/.
Pierre Lindenbaum,
PS: (This article has been reviewed while the related article from Bernd Jagla & al. was accepted: "Extending KNIME for Next Generation Sequencing data analysis" PMID: http://bioinformatics.oxfordjournals.org/content/early/2011/08/26/bioinformatics.btr478.abstract )