Hi Christian, hi Gerhard,
wouldn't it be better to have SCIFIO properly supporting those hdf5 files? I did some preliminary work on a h5 reader implemented as a SCIFIO format on the recent hackathon. I didn't find the time to continue this yet, but it's on my list, because hdf5 support for files created by Huygens Pro or ilastik would benefit both ImageJ and KNIME worlds.
Cheers,
Jan