KNIME 3.0.1 hanging randomly under MacOSX (JVM 1.8)

rnibali · December 5, 2015, 2:52pm

Hi

For an urgent data prediction analysis I was supposed to finish today, I decided to give KNIME a spin, however it keeps hanging (live-lock), crashing and spitting out quite a few error traces. Here you have a selection of them:

!SESSION 2015-11-28 19:23:35.430 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.8.0_60
java.vendor=Oracle Corporation
BootLoader constants: OS=macosx, ARCH=x86_64, WS=cocoa, NL=en_US
Framework arguments:  -keyring /Users/moreaki/.eclipse_keyring -showlocation
Command-line arguments:  -os macosx -ws cocoa -arch x86_64 -keyring /Users/moreaki/.eclipse_keyring -showlocation

!ENTRY org.eclipse.core.net 1 0 2015-11-28 19:23:49.874
!MESSAGE System property http.nonProxyHosts has been set to local|*.local|169.254/16|*.169.254/16 by an external source. This value will be overwritten using the values from the preferences

!ENTRY org.eclipse.core.runtime 4 0 2015-11-28 19:42:26.476
!MESSAGE Invalid input url:platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png
!STACK 0
java.io.IOException: Unable to resolve plug-in "platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png".
	at org.eclipse.core.internal.runtime.PlatformURLPluginConnection.parse(PlatformURLPluginConnection.java:65)
	at org.eclipse.core.internal.runtime.FindSupport.find(FindSupport.java:290)
	at org.eclipse.core.runtime.FileLocator.find(FileLocator.java:152)
	at org.eclipse.ui.plugin.AbstractUIPlugin.imageDescriptorFromPlugin(AbstractUIPlugin.java:713)
	at org.knime.product.KNIMESplashHandler.getSplashIcon(KNIMESplashHandler.java:300)
	at org.knime.product.KNIMESplashHandler.createUIImages(KNIMESplashHandler.java:332)
	at org.knime.product.KNIMESplashHandler.init(KNIMESplashHandler.java:222)
	at org.eclipse.ui.internal.Workbench$6.run(Workbench.java:834)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench.createSplashWrapper(Workbench.java:849)
	at org.eclipse.ui.internal.Workbench.access$5(Workbench.java:771)
	at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:628)
	at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
	at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:598)
	at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
	at org.knime.product.rcp.KNIMEApplication.start(KNIMEApplication.java:132)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
	at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
	at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
!SESSION 2015-12-04 22:27:15.623 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.8.0_60
java.vendor=Oracle Corporation
BootLoader constants: OS=macosx, ARCH=x86_64, WS=cocoa, NL=en_US
Framework arguments:  -keyring /Users/moreaki/.eclipse_keyring -showlocation
Command-line arguments:  -os macosx -ws cocoa -arch x86_64 -keyring /Users/moreaki/.eclipse_keyring -showlocation

!ENTRY org.eclipse.core.net 1 0 2015-12-04 22:27:19.565
!MESSAGE System property http.nonProxyHosts has been set to local|*.local|169.254/16|*.169.254/16 by an external source. This value will be overwritten using the values from the preferences

!ENTRY org.eclipse.core.runtime 4 0 2015-12-04 22:27:30.672
!MESSAGE Invalid input url:platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png
!STACK 0
java.io.IOException: Unable to resolve plug-in "platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png".
	at org.eclipse.core.internal.runtime.PlatformURLPluginConnection.parse(PlatformURLPluginConnection.java:65)
	at org.eclipse.core.internal.runtime.FindSupport.find(FindSupport.java:290)
	at org.eclipse.core.runtime.FileLocator.find(FileLocator.java:152)
	at org.eclipse.ui.plugin.AbstractUIPlugin.imageDescriptorFromPlugin(AbstractUIPlugin.java:713)
	at org.knime.product.KNIMESplashHandler.getSplashIcon(KNIMESplashHandler.java:300)
	at org.knime.product.KNIMESplashHandler.createUIImages(KNIMESplashHandler.java:332)
	at org.knime.product.KNIMESplashHandler.init(KNIMESplashHandler.java:222)
	at org.eclipse.ui.internal.Workbench$6.run(Workbench.java:834)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench.createSplashWrapper(Workbench.java:849)
	at org.eclipse.ui.internal.Workbench.access$5(Workbench.java:771)
	at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:628)
	at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
	at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:598)
	at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
	at org.knime.product.rcp.KNIMEApplication.start(KNIMEApplication.java:132)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
	at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
	at org.eclipse.equinox.launcher.Main.run(Main.java:1515)

!ENTRY org.eclipse.ui.workbench 4 2 2015-12-04 22:27:45.758
!MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.ui.workbench".
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

!ENTRY org.eclipse.ui 4 4 2015-12-04 22:27:45.772
!MESSAGE Unhandled Exception

!ENTRY org.eclipse.equinox.p2.ui.sdk.scheduler 4 0 2015-12-04 22:27:45.773
!MESSAGE Unable to execute early startup code for an extension
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

!ENTRY org.eclipse.osgi 4 0 2015-12-05 14:28:58.584
!MESSAGE Application error
!STACK 1
org.eclipse.swt.SWTException: Failed to execute runnable (java.lang.NullPointerException)
	at org.eclipse.swt.SWT.error(SWT.java:4491)
	at org.eclipse.swt.SWT.error(SWT.java:4406)
	at org.eclipse.swt.widgets.Synchronizer.runAsyncMessages(Synchronizer.java:138)
	at org.eclipse.swt.widgets.Display.runAsyncMessages(Display.java:4024)
	at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3700)
	at org.eclipse.swt.widgets.Display.release(Display.java:3762)
	at org.eclipse.swt.graphics.Device.dispose(Device.java:190)
	at org.knime.product.rcp.KNIMEApplication.start(KNIMEApplication.java:148)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
	at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
	at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
Caused by: java.lang.NullPointerException
	at org.eclipse.ui.internal.e4.compatibility.SelectionService.getSelection(SelectionService.java:333)
	at org.eclipse.gef.ui.actions.SelectionAction.update(SelectionAction.java:125)
	at org.eclipse.gef.ui.parts.GraphicalEditor.updateActions(GraphicalEditor.java:458)
	at org.knime.workbench.editor2.WorkflowEditor.firePropertyChange(WorkflowEditor.java:2193)
	at org.knime.workbench.editor2.WorkflowEditor$14.run(WorkflowEditor.java:2948)
	at org.eclipse.swt.widgets.RunnableLock.run(RunnableLock.java:35)
	at org.eclipse.swt.widgets.Synchronizer.runAsyncMessages(Synchronizer.java:135)
	... 17 more

!ENTRY org.eclipse.e4.ui.workbench 4 0 2015-12-05 14:28:58.618
!MESSAGE FrameworkEvent ERROR
!STACK 0
org.eclipse.e4.core.di.InjectionException: org.eclipse.swt.SWTException: Invalid thread access
	at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:68)
	at org.eclipse.e4.core.internal.di.InjectorImpl.processAnnotated(InjectorImpl.java:898)
	at org.eclipse.e4.core.internal.di.InjectorImpl.disposed(InjectorImpl.java:398)
	at org.eclipse.e4.core.internal.di.Requestor.disposed(Requestor.java:148)
	at org.eclipse.e4.core.internal.contexts.ContextObjectSupplier$ContextInjectionListener.update(ContextObjectSupplier.java:78)
	at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.update(TrackableComputationExt.java:111)
	at org.eclipse.e4.core.internal.contexts.TrackableComputationExt.handleInvalid(TrackableComputationExt.java:74)
	at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:174)
	at org.eclipse.e4.core.internal.contexts.EclipseContext.dispose(EclipseContext.java:159)
	at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.dispose(EclipseContextOSGi.java:106)
	at org.eclipse.e4.core.internal.contexts.osgi.EclipseContextOSGi.bundleChanged(EclipseContextOSGi.java:139)
	at org.eclipse.osgi.internal.framework.BundleContextImpl.dispatchEvent(BundleContextImpl.java:902)
	at org.eclipse.osgi.framework.eventmgr.EventManager.dispatchEvent(EventManager.java:230)
	at org.eclipse.osgi.framework.eventmgr.ListenerQueue.dispatchEventSynchronous(ListenerQueue.java:148)
	at org.eclipse.osgi.internal.framework.EquinoxEventPublisher.publishBundleEventPrivileged(EquinoxEventPublisher.java:165)
	at org.eclipse.osgi.internal.framework.EquinoxEventPublisher.publishBundleEvent(EquinoxEventPublisher.java:75)
	at org.eclipse.osgi.internal.framework.EquinoxEventPublisher.publishBundleEvent(EquinoxEventPublisher.java:67)
	at org.eclipse.osgi.internal.framework.EquinoxContainerAdaptor.publishModuleEvent(EquinoxContainerAdaptor.java:102)
	at org.eclipse.osgi.container.Module.publishEvent(Module.java:466)
	at org.eclipse.osgi.container.Module.doStop(Module.java:624)
	at org.eclipse.osgi.container.Module.stop(Module.java:488)
	at org.eclipse.osgi.container.SystemModule.stop(SystemModule.java:186)
	at org.eclipse.osgi.internal.framework.EquinoxBundle$SystemBundle$EquinoxSystemModule$1.run(EquinoxBundle.java:159)
	at java.lang.Thread.run(Thread.java:745)
Caused by: org.eclipse.swt.SWTException: Invalid thread access
	at org.eclipse.swt.SWT.error(SWT.java:4491)
	at org.eclipse.swt.SWT.error(SWT.java:4406)
	at org.eclipse.swt.SWT.error(SWT.java:4377)
	at org.eclipse.swt.widgets.Display.error(Display.java:1097)
	at org.eclipse.swt.widgets.Display.checkDevice(Display.java:631)
	at org.eclipse.swt.widgets.Display.removeFilter(Display.java:3938)
	at org.eclipse.e4.ui.workbench.renderers.swt.MenuManagerRenderer.contextDisposed(MenuManagerRenderer.java:338)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.e4.core.internal.di.MethodRequestor.execute(MethodRequestor.java:56)
	... 23 more
!SESSION 2015-12-05 14:31:57.367 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.8.0_60
java.vendor=Oracle Corporation
BootLoader constants: OS=macosx, ARCH=x86_64, WS=cocoa, NL=en_US
Framework arguments:  -keyring /Users/moreaki/.eclipse_keyring -showlocation
Command-line arguments:  -os macosx -ws cocoa -arch x86_64 -keyring /Users/moreaki/.eclipse_keyring -showlocation

!ENTRY org.eclipse.core.net 1 0 2015-12-05 14:32:10.141
!MESSAGE System property http.nonProxyHosts has been set to local|*.local|169.254/16|*.169.254/16 by an external source. This value will be overwritten using the values from the preferences

!ENTRY org.eclipse.core.runtime 4 0 2015-12-05 14:32:19.206
!MESSAGE Invalid input url:platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png
!STACK 0
java.io.IOException: Unable to resolve plug-in "platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png".
	at org.eclipse.core.internal.runtime.PlatformURLPluginConnection.parse(PlatformURLPluginConnection.java:65)
	at org.eclipse.core.internal.runtime.FindSupport.find(FindSupport.java:290)
	at org.eclipse.core.runtime.FileLocator.find(FileLocator.java:152)
	at org.eclipse.ui.plugin.AbstractUIPlugin.imageDescriptorFromPlugin(AbstractUIPlugin.java:713)
	at org.knime.product.KNIMESplashHandler.getSplashIcon(KNIMESplashHandler.java:300)
	at org.knime.product.KNIMESplashHandler.createUIImages(KNIMESplashHandler.java:332)
	at org.knime.product.KNIMESplashHandler.init(KNIMESplashHandler.java:222)
	at org.eclipse.ui.internal.Workbench$6.run(Workbench.java:834)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench.createSplashWrapper(Workbench.java:849)
	at org.eclipse.ui.internal.Workbench.access$5(Workbench.java:771)
	at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:628)
	at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
	at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:598)
	at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
	at org.knime.product.rcp.KNIMEApplication.start(KNIMEApplication.java:132)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
	at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
	at org.eclipse.equinox.launcher.Main.run(Main.java:1515)

!ENTRY org.eclipse.ui.workbench 4 2 2015-12-05 14:32:33.043
!MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.ui.workbench".
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

!ENTRY org.eclipse.ui 4 4 2015-12-05 14:32:33.060
!MESSAGE Unhandled Exception

!ENTRY org.eclipse.equinox.p2.ui.sdk.scheduler 4 0 2015-12-05 14:32:33.061
!MESSAGE Unable to execute early startup code for an extension
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

Is there anything I can do to remedy the situation (re-install it, use a different OS, go back to an older version)? Do I have to remove the profile? How do I get this weka_splash_24.png file? Why did this start all of the sudden?

The only thing that could be related is that I tried to install a community package at some point.

Thanks for a quick reply if possible.

Best regards

Roberto

rnibali · December 5, 2015, 3:07pm

ADDENDUM:

Inside knime/.metadata/.plugins, I deleted org.eclipse.jdt.ui, and inside knime/.metadata, I deleted the .lock file. This seems to have stabilized the whole thing for the moment.

Not sure if this was a good idea, but dtrace'ing the open,read,write syscalls indicated the the livelock seem to occur because of some stuff KNIME tried to do with those files mentioned above.

Let's hope it stays stable for more than 10 minutes ;). The error logs have been reduced to the following:

!SESSION 2015-12-05 14:58:50.484 -----------------------------------------------
eclipse.buildId=unknown
java.version=1.8.0_60
java.vendor=Oracle Corporation
BootLoader constants: OS=macosx, ARCH=x86_64, WS=cocoa, NL=en_US
Framework arguments:  -keyring /Users/moreaki/.eclipse_keyring -showlocation
Command-line arguments:  -os macosx -ws cocoa -arch x86_64 -keyring /Users/moreaki/.eclipse_keyring -showlocation

!ENTRY org.eclipse.core.net 1 0 2015-12-05 14:58:57.470
!MESSAGE System property http.nonProxyHosts has been set to local|*.local|169.254/16|*.169.254/16 by an external source. This value will be overwritten using the values from the preferences

!ENTRY org.eclipse.core.runtime 4 0 2015-12-05 14:59:07.419
!MESSAGE Invalid input url:platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png
!STACK 0
java.io.IOException: Unable to resolve plug-in "platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png".
	at org.eclipse.core.internal.runtime.PlatformURLPluginConnection.parse(PlatformURLPluginConnection.java:65)
	at org.eclipse.core.internal.runtime.FindSupport.find(FindSupport.java:290)
	at org.eclipse.core.runtime.FileLocator.find(FileLocator.java:152)
	at org.eclipse.ui.plugin.AbstractUIPlugin.imageDescriptorFromPlugin(AbstractUIPlugin.java:713)
	at org.knime.product.KNIMESplashHandler.getSplashIcon(KNIMESplashHandler.java:300)
	at org.knime.product.KNIMESplashHandler.createUIImages(KNIMESplashHandler.java:332)
	at org.knime.product.KNIMESplashHandler.init(KNIMESplashHandler.java:222)
	at org.eclipse.ui.internal.Workbench$6.run(Workbench.java:834)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench.createSplashWrapper(Workbench.java:849)
	at org.eclipse.ui.internal.Workbench.access$5(Workbench.java:771)
	at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:628)
	at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
	at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:598)
	at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
	at org.knime.product.rcp.KNIMEApplication.start(KNIMEApplication.java:132)
	at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
	at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
	at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
	at java.lang.reflect.Method.invoke(Method.java:497)
	at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
	at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
	at org.eclipse.equinox.launcher.Main.run(Main.java:1515)

!ENTRY org.eclipse.ui.workbench 4 2 2015-12-05 14:59:21.022
!MESSAGE Problems occurred when invoking code from plug-in: "org.eclipse.ui.workbench".
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

!ENTRY org.eclipse.ui 4 4 2015-12-05 14:59:21.035
!MESSAGE Unhandled Exception

!ENTRY org.eclipse.equinox.p2.ui.sdk.scheduler 4 0 2015-12-05 14:59:21.036
!MESSAGE Unable to execute early startup code for an extension
!STACK 0
java.lang.IllegalStateException: The profile is currently in use.
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.internalGetProfileStateProperties(SimpleProfileRegistry.java:1182)
	at org.eclipse.equinox.internal.p2.engine.SimpleProfileRegistry.getProfileStateProperties(SimpleProfileRegistry.java:1172)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.isFirstTimeRunningThisSharedInstance(MigrationSupport.java:133)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.migration.MigrationSupport.performMigration(MigrationSupport.java:54)
	at org.eclipse.equinox.internal.p2.ui.sdk.scheduler.AutomaticUpdateScheduler.earlyStartup(AutomaticUpdateScheduler.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.runEarlyStartup(EarlyStartupRunnable.java:90)
	at org.eclipse.ui.internal.EarlyStartupRunnable.run(EarlyStartupRunnable.java:68)
	at org.eclipse.core.runtime.SafeRunner.run(SafeRunner.java:42)
	at org.eclipse.ui.internal.Workbench$56.run(Workbench.java:2812)
	at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

Regards

Roberto

kilian.thiel · December 14, 2015, 3:03pm

Hi Roberto,

to you have the same problems with the KNIME Analytics Platform version 3.1?

Cheers, Kilian

albrecht · December 17, 2015, 11:29am

Hi Roberto,

do you still have these issues? Did you try Kilian's suggestion with using KNIME Analytics Platform 3.1?

If you are seeing these freezes still, we would be interested in seeing a jstack extracted from the hanging process to further analyze the problem.

Regards,
Christian

enribueno · December 4, 2017, 3:23pm

Hi all,

I try to connect to Mongo via KNIME, and I can do it, but with small documents. Once I try to transfer big json documents, always appears the same problem related to:

"Unable to resolve plug in"platform:/plugin/org.knime.ext.weka_3.7/icons/weka_splash_24.png"

Do you know where could it be the problem? what is "weka_splash_24.png"?

Thanks in advance,

Enrique