Dear all,
Manuel just uploaded a new beta version of the RDKit binaries. The "nightly" version of the RDKit nodes are now using the new binaries. There's no terribly exciting new functionality yet; that's coming in the next week or two when we add some new nodes! :-)
For those interested in such things, these binaries correspond to the RDKit 2013.09.1beta1 release. Release notes for it are here: https://raw.github.com/rdkit/rdkit/Release_2013_09_1beta1/ReleaseNotes.txt
Everything is working fine for us, but please do let us know if you encounter any problems.
Enjoy!
-greg