I have an SD file from a vendor partner and they have errors in the formatting which do not allow the correct reading of the SD file. In this specific example there are two carrage return and line feeds between the molecule end (M END) and the first token which is the catalog number.
I’m looking for any help on how others in the community may have corrected these errors using KNIME as the number of errors are large and the file is also large so manually is not sustainable. I will need to be processing this file on a routine basis and unfortunately the vendor does not have the knowledge to correct their file.
My goal is to create a workflow which can solve these types of issues and post it on the HUB for others. Currently I don’t see any content but I don’t believe I’m the only one dealing with these types of issues
Thanks in advance,