I am able to change featureXML results into a KNIME table using the TextExporter and FeatureTextReader, but it does not transfer over columns such as "file_origin" and other XML items that are defined by "userparam". Is there a good workaround or fix for this?
We are in the process of deprecating the specific Feature/Consensus/IDTextReader nodes in the favor of the more general MzTabExporter and MzTabReader combination.
Have a look into chaining these two nodes and view the resulting tables. Hopefully, they yield the information you need.
Thanks. I tried chaining the mzTab nodes as you suggested but then ran into this error: Execute failed: For input string: "3379.80589999998|3433.54720000002"
It looks like it is having trouble parsing the RT range column from an identXML file.
This still does not work for me. I must be doing something wrong as I don't think the MzTabReader wouldn't be able to recognize the output from MzTabExporter.