Generating 3D coordinates of compounds with hash and wedge bonds

I have a collection of compounds in sdf format which I am trying to generate 3D coordinates for. These compounds have hashed and wedged bonds as a result of stereoisomer enumeration. However when I use the Generate Coordinates node, it gives me the same compounds again in 2D but with the hash and wedge bonds. Is there a way to remove these hash and wedge bonds without removing the different stereoisomers?


Can you clarify which node you’re using?

I am using the RDKit Generate Coordinates node with the 3D coordinates option.

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