Issues with sanitization using the two component reaction node

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1

Hi,
Hoping someone could help, I am trying to react some carboxylic acids with amines to form amides and I have a Marvin sketch mapped rxn input, and the COOH and amines are being input into the correct places. When it runs it says “A product molecule could not be sanitized successfully - Skipping it [all products]” but it outputs the correct products.

Thanks for any help,

2

Hi @becko ,
Welcome to the KNIME Community!
Could you please share the workflow with some dummy data (if the data is confidential) so that we can better understand the problem?

Thanks,
Sanket

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