Scraping chemical data from ChemBL or PubChem with Selenium node

Hi,
I am going to make a workflow for scraping chemical data from PubChem or ChemBL databases. So, lets say, I have a list of chemical compounds (synonym) and I want to do the search by entering the synonyms in the search box to get the corresponding Smiles. I started from the WebDriver Factory node and then Start WebDriver node followed by the Find Elements node. However, I don’t know how to link the compound list to the search box of ChemBL/PubChem. I am wondering if anyone knows how to work out this?

Thanks,
Nasir

Hi Nasir,

could you post the current version of the workflow to get an idea where you’re at?

Thanks,
Philipp

Hi,

I noticed PubChem node is available for this purpose. So, I see how it goes with these nodes and keep you posted.

Thanks,
Nasir

Sure. Fingers crossed!

–Philipp