Tautomer Generator "Object missing ('?')"

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Hi.

I have used the AMBIT tautomer generator to generate tautomers, however some of them show "Object missing (‘?’) in the output instead of a tautomer. There isn’t an error log, but the next step which generates 3D coordinates tells me its an empty cell.

What’s causing the error, and what is the best way around it?

Thanks.

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