cannot install RDKit, vernalis, and other community nodes

jan_wollenhaupt · August 25, 2023, 2:00pm

Hi all,

could not figure out how to re-open a thread with unresolved problem

is there a solution to this one?

I have an Ubuntu Linux and newest version of KNIME, but still cannot install RDKit and other nodes.

always get:

*** Welcome to KNIME Analytics Platform v5.1.0.v202307121410 ***
*** Copyright by KNIME AG, Zurich, Switzerland ***

Log file is located at:
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.loop.CutTypeLoopStartNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.uniquifyids.UniquifyIdsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.maxcuts.rdkit.RDKitMMPMaxCutsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPFilterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPSplitterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!

jan_wollenhaupt · August 25, 2023, 2:00pm

ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMulticutMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.Frag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.ReferenceFrag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderMatchingBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderCuttableBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.mmp.nodes.transform.rdkit.RWMolApplyTransformNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
Node ‘com.vernalis.knime.chem.pmi.nodes.props.pmiderived.PmiDerivedPropsNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
Node ‘com.vernalis.knime.chem.pmi.nodes.props.confenergy.ConformerEnergiesNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
Node ‘org.rdkit.knime.nodes.molecule2rdkit.Molecule2RDKitConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.rdkit2molecule.RDKit2MoleculeConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.inchi2rdkit.RDKitInChI2MoleculeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.rdkit2inchi.RDKitMolecule2InChINodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.iupac2rdkit.RDKitIUPACToRDKitNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.canonsmiles.RDKitCanonicalSmilesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.addhs.RDKitAddHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.removehs.RDKitRemoveHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.aromatize.RDKitAromatizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.kekulize.RDKitKekulizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.saltstripper.RDKitSaltStripperNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.descriptorcalculation.DescriptorCalculationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.calculatecharges.RDKitCalculateChargesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.addcoordinates.RDKitAddCoordinatesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.optimizegeometry.RDKitOptimizeGeometryNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.addconformers.RDKitAddConformersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.open3dalignment.RDKitOpen3DAlignmentNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.rmsdfilter.RDKitRMSDFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitCountBasedFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.fingerprintreader.RDKitFingerprintReaderNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.fingerprintwriter.RDKitFingerprintWriterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.diversitypicker.RDKitDiversityPickerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.molextractor.RDKitMoleculeExtractorNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.molfragmenter.RDKitMolFragmenterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.murckoscaffold.RDKitMurckoScaffoldNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.mcs.RDKitMCSNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.substructfilter.RDKitSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.moleculesubstructfilter.RDKitMoleculeSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.functionalgroupfilter.FunctionalGroupFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.substructurecounter.SubstructureCounterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node ‘org.rdkit.knime.nodes.onecomponentreaction2.RDKitOneComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
Node

jan_wollenhaupt · August 25, 2023, 2:00pm

‘org.rdkit.knime.nodes.twocomponentreaction2.RDKitTwoComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.chemicaltransformation.RDKitChemicalTransformationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.interactivetable.RDKitInteractiveTableNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.smilesheaders.RDKitSmilesHeadersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.highlighting.RDKitHighlightingNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2svg.RDKit2SVGNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.sdfdifferencechecker.RDKitSDFDifferenceCheckerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroups.RDKitRGroupsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroupdecomposition.RDKitRGroupDecompositionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.structurenormalizer.RDKitStructureNormalizerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.moleculecatalogfilter.RDKitMoleculeCatalogFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.adjustqueryproperties.RDKitAdjustQueryPropertiesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.loop.CutTypeLoopStartNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.uniquifyids.UniquifyIdsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.maxcuts.rdkit.RDKitMMPMaxCutsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPFilterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPSplitterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMulticutMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.Frag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.ReferenceFrag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderMatchingBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderCuttableBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.transform.rdkit.RWMolApplyTransformNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.chem.pmi.nodes.props.pmiderived.PmiDerivedPropsNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR NodeRepository Node ‘com.vernalis.knime.chem.pmi.nodes.props.confenergy.ConformerEnergiesNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molecule2rdkit.Molecule2RDKitConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2molecule.RDKit2MoleculeConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.inchi2rdkit.RDKitInChI2MoleculeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2inchi.RDKitMolecule2InChINodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.iupac2rdkit.RDKitIUPACToRDKitNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.canonsmiles.RDKitCanonicalSmilesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addhs.RDKitAddHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.removehs.RDKitRemoveHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.aromatize.RDKitAromatizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.kekulize.RDKitKekulizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.saltstripper.RDKitSaltStripperNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.descriptorcalculation.DescriptorCalculationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.calculatecharges.RDKitCalculateChargesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addcoordinates.RDKitAddCoordinatesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.optimizegeometry.RDKitOptimizeGeometryNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addconformers.RDKitAddConformersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.open3dalignment.RDKitOpen3DAlignmentNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rmsdfilter.RDKitRMSDFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitCountBasedFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.fingerprintreader.RDKitFingerprintReaderNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.fingerprintwriter.RDKitFingerprintWriterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.diversitypicker.RDKitDiversityPickerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molextractor.RDKitMoleculeExtractorNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molfragmenter.RDKitMolFragmenterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.murckoscaffold.RDKitMurckoScaffoldNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.mcs.RDKitMCSNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.substructfilter.RDKitSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.moleculesubstructfilter.RDKitMoleculeSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.functionalgroupfilter.FunctionalGroupFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.substructurecounter.SubstructureCounterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.onecomponentreaction2.RDKitOneComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.twocomponentreaction2.RDKitTwoComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.chemicaltransformation.RDKitChemicalTransformationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.interactivetable.RDKitInteractiveTableNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.smilesheaders.RDKitSmilesHeadersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.highlighting.RDKitHighlightingNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2svg.RDKit2SVGNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.sdfdifferencechecker.RDKitSDFDifferenceCheckerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroups.RDKitRGroupsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroupdecomposition.RDKitRGroupDecompositionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.structurenormalizer.RDKitStructureNormalizerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.moleculecatalogfilter.RDKitMoleculeCatalogFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.adjustqueryproperties.RDKitAdjustQueryPropertiesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.rdkit.nodes.scaffoldkeys.ScaffoldKeysNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.transform.toprincaxes.AlignToPrincipalAxesNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.rdkit.nodes.scaffoldkeys.ScaffoldKeysNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.confs.rdkitgenerate.RdkitConfgenNodeFactory: org/RDKit/ROMol
ERROR CoreUtil Could not create instance of node com.vernalis.knime.chem.pmi.nodes.transform.toprincaxes.AlignToPrincipalAxesNodeFactory: org/RDKit/ROMol
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.loop.CutTypeLoopStartNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.uniquifyids.UniquifyIdsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.maxcuts.rdkit.RDKitMMPMaxCutsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPFilterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPSplitterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMulticutMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.Frag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.ReferenceFrag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderMatchingBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderCuttableBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.mmp.nodes.transform.rdkit.RWMolApplyTransformNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR RepositoryManager Node ‘com.vernalis.knime.chem.pmi.nodes.props.pmiderived.PmiDerivedPropsNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR RepositoryManager Node ‘com.vernalis.knime.chem.pmi.nodes.props.confenergy.ConformerEnergiesNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.molecule2rdkit.Molecule2RDKitConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rdkit2molecule.RDKit2MoleculeConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.inchi2rdkit.RDKitInChI2MoleculeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rdkit2inchi.RDKitMolecule2InChINodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.iupac2rdkit.RDKitIUPACToRDKitNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.canonsmiles.RDKitCanonicalSmilesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.addhs.RDKitAddHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.removehs.RDKitRemoveHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.aromatize.RDKitAromatizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.kekulize.RDKitKekulizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.saltstripper.RDKitSaltStripperNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.descriptorcalculation.DescriptorCalculationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.calculatecharges.RDKitCalculateChargesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.addcoordinates.RDKitAddCoordinatesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.optimizegeometry.RDKitOptimizeGeometryNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.addconformers.RDKitAddConformersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.open3dalignment.RDKitOpen3DAlignmentNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rmsdfilter.RDKitRMSDFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitCountBasedFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.fingerprintreader.RDKitFingerprintReaderNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.

jan_wollenhaupt · August 25, 2023, 2:01pm

ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.fingerprintwriter.RDKitFingerprintWriterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.diversitypicker.RDKitDiversityPickerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.molextractor.RDKitMoleculeExtractorNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.molfragmenter.RDKitMolFragmenterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.murckoscaffold.RDKitMurckoScaffoldNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.mcs.RDKitMCSNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.substructfilter.RDKitSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.moleculesubstructfilter.RDKitMoleculeSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.functionalgroupfilter.FunctionalGroupFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.substructurecounter.SubstructureCounterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.onecomponentreaction2.RDKitOneComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.twocomponentreaction2.RDKitTwoComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.chemicaltransformation.RDKitChemicalTransformationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.interactivetable.RDKitInteractiveTableNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.smilesheaders.RDKitSmilesHeadersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.highlighting.RDKitHighlightingNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rdkit2svg.RDKit2SVGNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.sdfdifferencechecker.RDKitSDFDifferenceCheckerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rgroups.RDKitRGroupsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.rgroupdecomposition.RDKitRGroupDecompositionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.structurenormalizer.RDKitStructureNormalizerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.moleculecatalogfilter.RDKitMoleculeCatalogFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR RepositoryManager Node ‘org.rdkit.knime.nodes.adjustqueryproperties.RDKitAdjustQueryPropertiesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.loop.CutTypeLoopStartNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.uniquifyids.UniquifyIdsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.maxcuts.rdkit.RDKitMMPMaxCutsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPFilterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.filter.rdkit.RDKitMMPSplitterNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.fragment.rdkit.RDKitMulticutMMPFragmentNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.Frag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.pairgen.frag2pair.ReferenceFrag2Pair3NodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderMatchingBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.fragutil.render.rdkit.RDKitMMPRenderCuttableBondsNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.mmp.nodes.transform.rdkit.RWMolApplyTransformNodeFactory’ from plugin ‘com.vernalis.knime.chem.mmp’ could not be created. The corresponding plugin bundle could not be activated!
ERROR NodeRepository Node ‘com.vernalis.knime.chem.pmi.nodes.props.pmiderived.PmiDerivedPropsNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR NodeRepository Node ‘com.vernalis.knime.chem.pmi.nodes.props.confenergy.ConformerEnergiesNodeFactory’ from plugin ‘com.vernalis.knime.chem.pmi’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molecule2rdkit.Molecule2RDKitConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2molecule.RDKit2MoleculeConverterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.inchi2rdkit.RDKitInChI2MoleculeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2inchi.RDKitMolecule2InChINodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.iupac2rdkit.RDKitIUPACToRDKitNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.canonsmiles.RDKitCanonicalSmilesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addhs.RDKitAddHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.removehs.RDKitRemoveHsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.aromatize.RDKitAromatizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.kekulize.RDKitKekulizeNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.saltstripper.RDKitSaltStripperNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.descriptorcalculation.DescriptorCalculationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.calculatecharges.RDKitCalculateChargesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addcoordinates.RDKitAddCoordinatesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.optimizegeometry.RDKitOptimizeGeometryNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.addconformers.RDKitAddConformersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.open3dalignment.RDKitOpen3DAlignmentNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rmsdfilter.RDKitRMSDFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkfingerprint.RDKitCountBasedFingerprintNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.fingerprintreader.RDKitFingerprintReaderNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.fingerprintwriter.RDKitFingerprintWriterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.diversitypicker.RDKitDiversityPickerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molextractor.RDKitMoleculeExtractorNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.molfragmenter.RDKitMolFragmenterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.murckoscaffold.RDKitMurckoScaffoldNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.mcs.RDKitMCSNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.substructfilter.RDKitSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.moleculesubstructfilter.RDKitMoleculeSubstructFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.functionalgroupfilter.FunctionalGroupFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.substructurecounter.SubstructureCounterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.onecomponentreaction2.RDKitOneComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.twocomponentreaction2.RDKitTwoComponentReactionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.chemicaltransformation.RDKitChemicalTransformationNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.interactivetable.RDKitInteractiveTableNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.smilesheaders.RDKitSmilesHeadersNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.highlighting.RDKitHighlightingNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rdkit2svg.RDKit2SVGNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.sdfdifferencechecker.RDKitSDFDifferenceCheckerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroups.RDKitRGroupsNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.rgroupdecomposition.RDKitRGroupDecompositionNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.structurenormalizer.RDKitStructureNormalizerNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.moleculecatalogfilter.RDKitMoleculeCatalogFilterNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
ERROR NodeRepository Node ‘org.rdkit.knime.nodes.adjustqueryproperties.RDKitAdjustQueryPropertiesNodeFactory’ from plugin ‘org.rdkit.knime.nodes’ could not be created.
WARN FontStore Using the system default font for annotations: Font {140628580013296}

jan_wollenhaupt · August 25, 2023, 2:02pm

just to show, … it’s a lot of error messages … same KNIME version works fine in Windows … but I need to use it in Linux

hope someone can help or has figured it out already on his/her machine

best regards,
Jan

steffen_KNIME · August 28, 2023, 8:21am

Hi Jan,

unfortunately, this is not possible until 5.1.1 comes out, which will hopefully happen soon.

Best regards
Steffen

jan_wollenhaupt · August 28, 2023, 8:39am

Hi Steffen,

thanks for the reply,
at least a relief that it is not a weird glitch in my system and that it is being worked on. Thank you for that!

I will be the first to download 5.1.1 then.

looking forward to it,

best regards,
Jan

steffen_KNIME · September 20, 2023, 12:42pm

@jan_wollenhaupt

jan_wollenhaupt · September 20, 2023, 1:16pm

Hi @steffen_KNIME ,

thanks for the update.

It did not work with doing an in-place update of 5.1.0 to 5.1.1,
however, doing a fresh installation of 5.1.1 works.

Looks all fine now, i.e. none of the mentioned error messages and all the nodes can be used.

best regards,
Jan

system · October 25, 2023, 2:09pm

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